DaMBIC Publications 2010-2022


  1. Traynor S, Jakobsen ND, Ebbesen MF, Bennedsen SN, Johansen S, Ebstrup ML, et al. SSX2 promotes the formation of a novel type of intranuclear lamin bodies. International Journal of Biochemistry & Cell Biology. 2022;142.  
  2. Xu MN, Oppong-Danquah E, Wang XY, Oddsson S, Abdelrahman A, Pedersen SV, et al. Novel methods to characterise spatial distribution and enantiomeric composition of usnic acids in four Icelandic lichens. Phytochemistry. 2022;200. 
  3. Wustner D. Dynamic Mode Decomposition of Fluorescence Loss in Photobleaching Microscopy Data for Model-Free Analysis of Protein Transport and Aggregation in Living Cells. Sensors. 2022;22(13). 
  4. Ortner VK, Nguyen N, Brewer JR, Solovyeva V, Haedersdal M, Philipsen PA. Fractional CO2 laser ablation leads to enhanced permeation of a fluorescent dye in healthy and mycotic nails-An imaging investigation of laser-tissue effects and their impact on ungual drug delivery. Lasers in Surgery and Medicine. 2022;54(6):861-74. 
  5. Keshavarzi F, Knudsen NO, Komjani NM, Ebbesen MF, Brewer JR, Jafarzadeh S, et al. Enhancing the sweat resistance of sunscreens. Skin Research and Technology. 2022;28(2):225-35. 
  6. Keshanidokht S, Via MA, Falco CY, Clausen MP, Risbo J. Zein-stabilized emulsions by ethanol addition; stability and microstructure. Food Hydrocolloids. 2022;133. 
  7. Juhl AD, Wustner D. Pathways and Mechanisms of Cellular Cholesterol Efflux-Insight From Imaging. Frontiers in Cell and Developmental Biology. 2022;10. 
  8. Jakobsen ND, Kaiser K, Ebbesen MF, Lauritsen L, Gjerstorff MF, Kuntsche J, et al. The ROC skin model: A robust skin equivalent for permeation and live cell imaging studies. European Journal of Pharmaceutical Sciences. 2022;178. 
  9. Iachina I, Lomholt MA, Eriksen JH, Brewer JR. Multilayer diffusion modeling and Coherent anti-Stokes Raman scattering microscopy for spatially resolved water diffusion measurements in human skin. Journal of Biophotonics. 2022;15(10). 
  10. Catarino CM, Kaiser K, Baltazar T, Catarino LM, Brewer JR, Karande P. Evaluation of native and non-native biomaterials for engineering human skin tissue. Bioengineering & Translational Medicine. 2022;7(3). 
  11. Bonilla JC, Sorensen JL, Warming AS, Clausen MP. Quantitative image analysis of protein foam microstructure and its correlation with rheological properties: Egg white foam. Food Hydrocolloids. 2022;133. 
  12. Bonilla JC, Clausen MP. Super-resolution microscopy to visualize and quantify protein microstructural organization in food materials and its relation to rheology: Egg white proteins. Food Hydrocolloids. 2022;124. 
  13. Alam P, Holst MR, Lauritsen L, Nielsen J, Nielsen SSE, Jensen PH, et al. Polarized alpha-synuclein trafficking and transcytosis across brain endothelial cells via Rab7-decorated carriers. Fluids and Barriers of the Cns. 2022;19(1). 


  14. Szomek M, Reinholdt P, Petersen D, Caci A, Kongsted J, Wustner D. Direct observation of nystatin binding to the plasma membrane of living cells. Biochimica Et Biophysica Acta-Biomembranes. 2021;1863(2). 
  15. Juhl AD, Lund FW, Jensen MLV, Szomek M, Heegaard CW, Guttmann P, et al. Niemann Pick C2 protein enables cholesterol transfer from endo-lysosomes to the plasma membrane for efflux by shedding of extracellular vesicles. Chemistry and Physics of Lipids. 2021;235. 
  16. Hornum M, Mulberg MW, Szomek M, Reinholdt P, Brewer JR, Wustner D, et al. Substituted 9-Diethylaminobenzo a phenoxazin-5-ones (Nile Red Analogues): Synthesis and Photophysical Properties. Journal of Organic Chemistry. 2021;86(2):1471-88. 
  17. Via MA, Baechle M, Stephan A, Vilgis TA, Clausen MP. Microscopic characterization of fatty liver-based emulsions: Bridging microstructure and texture in foie gras and pate. Physics of Fluids. 2021;33(11).
  18. Juhl AD, Heegaard CW, Werner S, Schneider G, Krishnan K, Covey DF, et al. Quantitative imaging of membrane contact sites for sterol transfer between endo-lysosomes and mitochondria in living cells. Scientific Reports. 2021;11(1).
  19. Maas MN, Hintzen JCJ, Loffler PMG, Mecinovic J. Targeting SARS-CoV-2 spike protein by stapled hACE2 peptides. Chemical Communications. 2021;57(26):3283-6.
  20. Notabi MK, Arnspang EC, Andersen MO. Antibody conjugated lipid nanoparticles as a targeted drug delivery system for hydrophobic pharmaceuticals. European Journal of Pharmaceutical Sciences. 2021;161.
  21. Okarmus J, Havelund JF, Ryding M, Schmidt SI, Bogetofte H, Heon-Roberts R, et al. Identification of bioactive metabolites in human iPSC-derived dopaminergic neurons with PARK2 mutation: Altered mitochondrial and energy metabolism. Stem Cell Reports. 2021;16(6):1510-26.
  22. Sarvari AK, Van Hauwaert EL, Markussen LK, Gammelmark E, Marcher AB, Ebbesen MF, et al. Plasticity of Epididymal Adipose Tissue in Response to Diet-Induced Obesity at Single-Nucleus Resolution. Cell Metabolism. 2021;33(2).


  23. Okarmus J, Bogetofte H, Schmidt SI, Ryding M, Garcia-Lopez S, Ryan BJ, et al. Lysosomal perturbations in human dopaminergic neurons derived from induced pluripotent stem cells with PARK2 mutation. Scientific Reports. 2020;10(1).
  24. Pazin WM, Furini LN, Solovyeva V, Lemma T, Rubira RJG, Jorgensen B, et al. Vibrational Spectroscopic Characterization and Coherent Anti-Stokes Raman Spectroscopy (CARS) Imaging of Artepillin C. Applied Spectroscopy. 2020;74(7):751-7.
  25. Glover ZJ, Francis MJ, Bisgaard AH, Andersen U, Johansen LB, Povey MJ, et al. Dynamic moisture loss explored through quantitative super-resolution microscopy, spatial micro-viscosity and macroscopic analyses in acid milk gels. Food Hydrocolloids. 2020;101.
  26. Olsen LF, Stock RP, Bagatolli LA. Glycolytic oscillations and intracellular K+ concentration are strongly coupled in the yeast Saccharomyces cerevisiae. Archives of Biochemistry and Biophysics. 2020;681.
  27. Hansen D, Brewer JR, Eiler J, Komjani NM, Hansen K, Thormann E. Water Diffusion in Polymer Composites Probed by Impedance Spectroscopy and Time-Resolved Chemical Imaging. Acs Applied Polymer Materials. 2020;2(2):837-45.
  28. Andersen TL, Baun C, Olsen BB, Dam JH, Thisgaard H. Improving Contrast and Detectability: Imaging with Co-55 Co-DOTATATE in Comparison with Cu-64 Cu-DOTATATE and Ga-68 Ga-DOTATATE. Journal of Nuclear Medicine. 2020;61(2):228-33.
  29. Khorooshi R, Marczynska J, Dieu RS, Wais V, Hansen CR, Kavan S, et al. Innate signaling within the central nervous system recruits protective neutrophils. Acta Neuropathologica Communications. 2020;8(1).


  30. Bogetofte H, Jensen P, Okarmus J, Schmidt SI, Agger M, Ryding M, et al. Perturbations in RhoA signalling cause altered migration and impaired neuritogenesis in human iPSC-derived neural cells with PARK2 mutation. Neurobiology of Disease. 2019;132.
  31. Mitran B, Thisgaard H, Rinne S, Dam JH, Azami F, Tolmachev V, et al. Selection of an optimal macrocyclic chelator improves the imaging of prostate cancer using cobalt-labeled GRPR antagonist RM26. Scientific Reports. 2019;9.
  32. Calori IR, Pazin WM, Brunaldi K, Pellosi DS, Caetano W, Tedesco AC, et al. Laurdan as fluorescent probe to determinate the critical micelle temperature of polymers from Pluronic (R)-coated fluid phase liposomes. Journal of Molecular Liquids. 2019;294.
  33. Zimmermann C, Troeltzsch D, Gimenez-Rivera VA, Galli SJ, Metz M, Maurer M, et al. Mast cells are critical for controlling the bacterial burden and the healing of infected wounds. Proceedings of the National Academy of Sciences of the United States of America. 2019;116(41):20500-4.
  34. Kuhns S, Seixas C, Pestana S, Tavares B, Nogueira R, Jacinto R, et al. Rab35 controls cilium length, function and membrane composition. Embo Reports. 2019;20(10).
  35. Sherry See Wai Leung, Jonathan Brewer, Luis A. Bagatolli, Jenifer L. Thewalt. Measuring molecular order for lipid membrane phase studies: Linear relationship between Laurdan generalized polarization and deuterium NMR order parameter. Biochimica et Biophysica Acta (BBA) - Biomembranes, 2019, https://doi.org/10.1016/j.bbamem.2019.183053
  36. Zachary J.Glover, Anne Højmark Bisgaard, Ulf Andersen, Megan J.Povey, Jonathan R.Brewer, Adam Cohen Simonsen. Cross-correlation analysis to quantify relative spatial distributions of fat and protein in super-resolution microscopy images of dairy gels. Food Hydrocolloids, 2019, https://doi.org/10.1016/j.foodhyd.2019.105225 
  37. Laura V. Ellis, Rebecca J. Bollinger, Hannah M. Weber, Steffen S. Madsen, and Christian K. Tipsmark. Differential Expression and Localization of Branchial AQP1 and AQP3 in Japanese Medaka (Oryzias latipes). Cells 2019, 8, 422; doi:10.3390/cells8050422
  38. Petya Popova, Martine Khataei Notabi, Christian Code ,Eva C.Arnspang, Morten Østergaard Andersen. Co-delivery of siRNA and etoposide to cancer cells using an MDEA esterquat based drug delivery system. European Journal of Pharmaceutical Sciences, 2019, 127, 142-150.
  39. Brian B.Jensen, Zachary J.Glover, Simon M.M.Pedersen, Ulf Andersen, Lars Duelund, Jonathan R.Brewer. Label Free Noninvasive Spatially Resolved NaCl Concentration Measurements using Coherent Anti-Stokes Raman Scattering Microscopy applied to Butter. Food Chemistry, 2019,  297, 124881 https://doi.org/10.1016/j.foodchem.2019.05.155  
  40. I.Iachina and J.R.Brewer. Strain Dependent Structural Changes in Major and Minor Ampullate spider silk revealed by Two-Photon Excitation Polarization. Biomacromolecules, DOI: 10.1021/acs.biomac.9b00368
  41. I.Iachina, I.E.Antonescu, J.Dreier, J.A.Sørensen, J.R.Brewer. The nanoscopic molecular pathway through human skin. Biochimica et Biophysica Acta (BBA) - General Subjects, 2019, doi.org/10.1016/j.bbagen.2019.04.012 
  42. Florian Lüskow, Hans Ulrik Riisgård, Vita Solovyeva, Jonathan R Brewer. Seasonal changes in bacteria and phytoplankton biomass control the condition index of the demosponge Halichondria panicea in temperate Danish waters. Marine Ecology Progress Series, 2019 608, 119-132
  43. Emma Pipó-Ollé, Prasad Walke, Martine K. Notabi, Rime B. El-Houri, Morten Østergaard Andersen, David Needham, Eva C. Arnspang. Uptake of New Lipid-coated Nanoparticles Containing Falcarindiol by Human Mesenchymal Stem Cells. JoVE, DOI: 10.3791/59094. 
  44. Marcher, A.B., Bendixen, S. M., Terkelsen, M. K., Hohmann, S. S., Hansen, M. H., Larsen, B. D., Mandrup, S., Dimke, H., Detlefsen, S. & Ravnskjaer, K. Transcriptional regulation of Hepatic Stellate Cell activation in NASH. Scientific Reports. 2019, 9, 1, Art. #2324 
  45. Zachary J.Glover, Carsten Ersch,  Ulf Andersen,  Melvin J.Holmes, Megan J. Povey, Jonathan R. Brewer, and Adam Cohen Simonsen. Super-resolution microscopy and empirically validated autocorrelation image analysis discriminates microstructures of dairy derived gels. Food Hydrocolloids, 2019,  90, 62-71
  46. Khan AM, Korzeniowska B, Gorshkov V,  Tahir M, Schrøder H,  Skytte L,  Rasmussen KL,  Khandige S, Jensen JM and Kjeldsen F. Silver Nanoparticles induced expression of proteins related to oxidative stress and neurodegeneration in human blood brain barrier model.  Nanotoxicology: 2019 doi:10.1080/17435390.2018.1540728.


  47. Taewook Kang, Pia Jensen, Vita Solovyeva, Jonathan R. Brewer, and Martin R. Larsen. Dynamic changes in the protein localization in the nuclear environment in pancreatic β-cell after brief glucose stimulation. J. Proteome Res. 2018. DOI: 10.1021/acs.jproteome.7b00930
  48. Maria Bloksgaard, Bjarne Thorsted, Jonathan R Brewer, Jo G. R De Mey. Assessing Collagen and Elastin Pressure-Dependent Microarchitectures in Live, Human Resistance Arteries by Label-Free Fluorescence Microscopy. Journal of Visualized Experiments. 2018, 2395667395.


  49. Thoke, H.S., Thorsteinsson, S., Stock, R.P., Bagatolli, L.A. and Olsen, L.F. The dynamics of intracellular water constrains glycolytic oscillations in Saccharomyces cerevisiae. Sci. Rep. 2017, 7:16250. doi:10.1038/s41598-017-16442-x
  50. Harvald, E. B., Sprenger, R. R., Dall, K. B., Ejsing, C. S., Nielsen, R., Mandrup, S., Murillo, A. B., Larance, M., Gartner, A., Lamond, A. I. and Færgeman, N. J. Global proteomic- and transcriptomic analyses of starvation responses reveal a central role for lipoprotein metabolism in acute starvation survival in C. elegans. 2017. http://dx.doi.org/10.1016/j.cels.2017.06.004
  51. Leißner T,  Jensen PBW, Liu Y, Brewer JB,  Fiutowski J, Rubahn HG, jelstrup-Hansen J. Mapping charge carrier density in organic thin-film transistors by time-resolved photoluminescence lifetime studies. 2017, 49: 69–75.
  52. Ferreira, N. S., Engelsby, H., Neess, D.,, Kelly, S. L., Volpert, G., Merrill, A. H., Futerman, A. H. and Færgeman, N. J. Regulation of Very-Long Acyl Chain Ceramide Synthesis by Acyl-CoA Binding Protein. J. Biol. Chem. 2017, 292(18), 7588-7597.
  53. Pedersen MT, Brewer J, Duelund L, Hansen PL. 2017. On the gastrophysics of jellyfish preparation. International Journal of Gastronomy and Food Science. https://doi.org/10.1016/j.ijgfs.2017.04.001
  54. Bloksgaard M, Leurgans TM, Spronck B, Heusinkveld MH, Thorsted B, Rosenstand K, Nissen I, Hansen UM, Brewer JR, Bagatolli LA, Rasmussen LM, Irmukhamedov A, Reesink KD, De Mey JGR. 2017. Imaging and modeling of acute pressure-induced changes of collagen and elastin microarchitectures in pig and human resistance arteries. Am J Physiol Heart Circ Physiol. doi: 10.1152/ajpheart.00110.2017.
  55. Purc A, Koszarna B, Iachina I, Friese DH, Tasior M,  Sobczyk K, Pędziński T, Brewer J and Gryko DT. 2017. The impact of interplay between electronic and steric effects on the synthesis and the linear and non-linear optical properties of diketopyrrolopyrrole bearing benzofuran moieties. Organic Chemistry Frontiers, 10.1039/C6QO00869K.
  56. Eriksen AZ, Brewer J, Andresen TL, Urquhart AJ. 2017. The diffusion dynamics of PEGylated liposomes in the intact vitreous of the ex vivo porcine eye: A fluorescence correlation spectroscopy and biodistribution study. Int J Pharm, 2017. 522(1-2): 90-97.
  57. Cheniour M, Brewer J, Bagatolli L, Marcillat O, Granjon T. Evidence of proteolipid domain formation in an inner mitochondrial membrane mimicking model. Biochim Biophys Acta , 20171861(5 Pt A): 969-976.
  58. Brewer JR, Thoke HS, Stocka RP, Bagatolli LA. Enzymatic studies on planar supported membranes using a widefield fluorescence LAURDAN Generalized Polarization imaging approach. Biochim Biophys Acta, 2017 1859(5): 888-895.


  59. E. Thomas Danielsen, Morten E. Moeller, Naoki Yamanaka,  Qiuxiang Ou, Janne M. Laursen, Caecilie Soenderholm, Ran Zhuo, Brian Phelps, Kevin Tang, Jie Zeng, Shu Kondo, Christian H. Nielsen,
    Eva B. Harvald, Nils J. Faergeman, Macy J. Haley, Kyle A. O’Connor, Kirst King-Jones, Michael B. O’Connor, and Kim F. Rewitz.  Drosophila Genome-Wide Screen Identifies Regulators of Steroid Hormone Production and Developmental Timing. 2016. Developmental Cell 37, 558–570.
  60. Habacher, C., Guo, Y., Venz, R., Gaidatzis, D., Harvald, E. B., Færgeman, N. J., Gut, H., and Ciosk, R. RNase-mediated regulation of body fat. 2016. Dev. Cell 39(3), 359-369.
  61. Søren Fisker Schmidt, Jesper Grud Skat Madsen, Kari Østerli Frafjord, Lars la Cour Poulsen, Sofia Salö, Michael Boergesen, Anne Loft, Bjørk Ditlev Larsen, Maria Stahl Madsen, Jens Juul Holst, Pierre Maechler, Louise Torp Dalgaard, Susanne Mandrup. Integrative Genomics Outlines a Biphasic Glucose Response and a ChREBP-RORγ Axis Regulating Proliferation in β Cells, Cell Reports, 2016, 9, 2359–2372.
  62. Johan Hygum Dam, Birgitte Brinkmann Olsen, Christina Baun, Poul-Flemming Høilund-Carlsen,Helge Thisgaard. In Vivo Evaluation of a Bombesin Analogue Labeled with Ga-68 and Co-55/57. Molecular Imaging and Biology, 2016, 18:368–376.
  63. Rikke R. Lund, Rikke Leth-Larsen, Tina Di Caterino, Mikkel G. Terp, Jeanette Nissen, Anne-Vibeke Lænkholm, Ole N. Jensen, and Henrik J. Ditzel. NADH-Cytochrome b5 Reductase 3 Promotes Colonization and Metastasis Formation and Is a Prognostic Marker of Disease-Free and Overall Survival in Estrogen Receptor-Negative Breast Cancer, Mol Cell Proteomics, 2015, 14: 2988–2999.
  64. Thomas M Leurgans, Maria Bloksgaard, Jonathan R. Brewer, Luis A. Bagatolli, Maise H. Fredgart, Kristoffer Rosenstand, Maria L. Hansen, Lars M. Rasmussen, Akhmadjon Irmukhamedov and Jo GR. De Mey. Endothelin-1 shifts the mediator of bradykinin-induced relaxation from NO to H2O2 in resistance arteries from patients with cardiovascular disease, British Journal of Pharmacology, 2016, 173:1653–1664.
  65. Thorsted B, Bloksgaard M, Groza A, Schousboe LP, Faergeman NJ, Sorensen JA, Svane-Knudsen V, Brewer JR. 2016. Biochemical and Bioimaging Evidence of Cholesterol in Acquired Cholesteatoma. Ann Otol Rhinol Laryngol 125:627-633.
  66. Nazir R, Thorsted B, Balčiūnas E, Mazur L, Deperasińska I, Samoć M, Brewer J, Farsari M, Gryko DT. 2016.. Journal of Materials Chemistry C. 4, 167-177.
  67. Leurgans TM, Bloksgaard M, Brewer JR, Bagatolli LA, Fredgart MH, Rosenstand K, Hansen ML, Rasmussen LM, Irmukhamedov A, De Mey JG. 2016. Endothelin‐1 shifts the mediator of bradykinin‐induced relaxation from NO to H2O2 in resistance arteries from patients with cardiovascular disease. British journal of pharmacology. 173(10), 1653–1664.
  68. Gomes MJ, Dreier J, Brewer J, Martins S, Brandl M, Sarmento B. 2016. A new approach for a blood-brain barrier model based on phospholipid vesicles: Membrane development and siRNA-loaded nanoparticles permeability. Journal of Membrane Science 503:8-15.
  69. Dreier J, Sorensen JA, Brewer JR. 2016. Superresolution and Fluorescence Dynamics Evidence Reveal That Intact Liposomes Do Not Cross the Human Skin Barrier. PLoS One 11:e0146514.
  70. Bhatia T, Cornelius F, Brewer J, Bagatolli LA, Simonsen AC, Ipsen JH, Mouritsen OG. 2016. Spatial distribution and activity of Na+/K+-ATPase in lipid bilayer membranes with phase boundaries. Biochimica et Biophysica Acta (BBA)-Biomembranes. 1858(6):1390-9.


  71. M. Bloksgaard, T. M. Leurgans, I. Nissen, P.S. Jensen, M. L. Hansen, J.R. Brewer, L.A. Bagatolli, N. Marcussen, A. Irmukhamedov, L.M. Rasmussen and J.G.R. De Mey. Elastin organization in pig and cardiovascular disease patients; pericardial resistance arteries, Journal of Vascular Research, 2015, 52:1-11.
  72. H.Seir Thoke, A. Tobiasen, J. Brewer, P. Lyngs Hansen, R. P. Stock, L.Folke Olsen and L.A. Bagatolli. Tight coupling of metabolic oscillations and intracellular water dynamics in Saccharomyces cerevisiae, PLoS ONE, 2015, 10(2): e0117308.
  73. Elias D, Vever H, Lænkholm A-V, Gjerstorff; MF, Yde CW, Lykkesfeldt AE, Ditzel HJ. Gene expression profiling identifies FYN as an important molecule in tamoxifen resistance and a predictor of early recurrence in patients treated with endocrine therapy. Oncogene 2015, 34,1919-1927.
  74. Zachar RM, Skjødt K, Marcussen N, Walter S, Toft A, Nielsen MR, Jensen BL, Svenningsen P.The Epithelial Sodium Channel gamma-Subunit Is Processed Proteolytically in Human Kidney. J Am Soc Nephrol. 2015, 26(1), 95–106.
  75. Greve KB, Lindgreen JN, Terp MG, Pedersen CB, Schmidt S, Mollenhauer J, Kristensen SB, Andersen RS, Relster MM, Ditzel HJ, Gjerstorff MF. Ectopic expression of cancer/testis antigen SSX2 induces DNA damage and promotes genomic instability. Mol Oncol. 2015, 9(2)437-449 . 
  76. V Solovyeva, L Johannes, AC Simonsen. Shiga toxin induces membrane reorganization and formation of long range lipid order. Soft Matter, 2015, 11(1):186-92.
  77. Thoke HS, Tobiesen A, Brewer J, Hansen PL, Stock RP, Olsen LF, Bagatolli LA. 2015. Tight Coupling of Metabolic Oscillations and Intracellular Water Dynamics in Saccharomyces cerevisiae. PLoS One 10:e0117308.
  78. Simonsen AC, Dreier J, Solovyeva V, Jeppesen JC, Brewer J. 2015. Orientational Texture of Membrane Domains: Effect of Lipid Composition and Binding of a Bacterial Toxin. Biophysical Journal 108:18a-19a.
  79. Miotke L, Maity A, Ji H, Brewer J, Astakhova K. 2015. Enzyme-Free Detection of Mutations in Cancer DNA Using Synthetic Oligonucleotide Probes and Fluorescence Microscopy. PLoS One 10:e0136720.
  80. Leißner T, Kostiučenko O, Brewer JR, Rubahn H-G, Fiutowski J. 2015. Nanostructure induced changes in lifetime and enhanced second-harmonic response of organic-plasmonic hybrids. Applied Physics Letters 107:251102.
  81. Jeppesen JC, Solovyeva V, Brewer JR, Johannes L, Hansen PL, Simonsen AC. 2015. Slow Relaxation of Shape and Orientational Texture in Membrane Gel Domains. Langmuir 31:12699-12707.
  82. Bloksgaard M, Leurgans TM, Jensen INPS, Hansen ML, Brewer JR, Bagatolli LA, Marcussen N, Irmukhamedov A, Rasmussen LM, Mey JGRD. 2015. Elastin organization in pig and cardiovascular disease patients’ pericardial resistance arteries Journal of Vascular Research. 52(1):1-11.
  83. Bhatia T, Husen P, Brewer J, Bagatolli LA, Hansen PL, Ipsen JH, Mouritsen OG. 2015. Preparing giant unilamellar vesicles (GUVs) of complex lipid mixtures on demand: Mixing small unilamellar vesicles of compositionally heterogeneous mixtures. Biochim Biophys Acta 1848:3175-3180.


  84.  NS Liland, AC Simonsen , L. Duelund, B.E. Torstensen, M.H. Berntssen , O.G. Mouritsen. Polyaromatic hydrocarbons do not disturb liquid-liquid phase coexistence, but increase the fluidity of model membranesChem Phys Lipids, 2014, 184:18-24.
  85. L.A. Bagatolli and D. Needham. Quantitative optical microscopy and micromanipulation studies on the lipid bilayer membranes of giant unilamellar vesicles. Chem. Phys. Lipids, 2014, 181:99-120.
  86. Verano-Braga T, Miethling-Graff R, Wojdyla K, Rogowska-Wrzesinska A, Brewer JR, Erdmann H, et al. Insights into the Cellular Response Triggered by Silver Nanoparticles Using Quantitative Proteomics. Acs Nano, 2014, 8(3):2161-75.
  87. Miethling-Graff R, Rumpker R, Richter M, Verano-Braga T, Kjeldsen F, Brewer J, et al. Exposure to silver nanoparticles induces size-and dose-dependent oxidative stress and cytotoxicity in human colon carcinoma cells. Toxicology in Vitro, 2014, 28(7) 1280-1289
  88. Krzeszewski M, Thorsted B, Brewer J, Gryko DT. Tetraaryl-, Pentaaryl-, and Hexaaryl-1,4-dihydropyrrolo 3,2-b pyrroles: Synthesis and Optical Properties. Journal of Organic Chemistry. 2014;79(7):3119-28.
  89. Janiga A, Bednarska D, Thorsted B, Brewer J, Gryko DT. Quadrupolar, emission-tunable pi-expanded 1,4-dihydropyrrolo 3,2-b pyrroles - synthesis and optical properties. Organic & Biomolecular Chemistry. 2014;12(18):2874-81.
  90. N. S. Liland, A. C. Simonsen, L. Duelund, B. E. Torstensen, M. H.G Berntssen, O. G Mouritsen. Polyaromatic hydrocarbons do not disturb liquid–liquid phase coexistence, but increase the fluidity of model membranes Chem. Phys. Lipids, 2014, 184: 18–24.
  91. Terp MG, Ditzel HJ. Application of proteomics in the study of rodent models of cancer.Proteomics Clin Appl. 2014, 8(9-10) 640-652.
  92. Gjerstorff M, Relster MM, Greve KBV, Moeller JB, Elias D, Lindgreen JN, Schmidt S, Mollenhauer J, Voldborg B, Pedersen CB, Brueckmann NH, Møllegård NE and Ditzel HJ. SSX2 is a novel DNA-binding protein that antagonizes polycomb group body formation and gene repression. Nucleic Acids Research. 2014, 42(18), 11433-11446
  93. Svenningsen P, Andersen K, Thuesen AD, Shin HS, Vanhoutte PM, Skøtt O,Jensen BL, Hill C, Hansen PB. T-type Ca2+ channels facilitate NO-formation, vasodilatation and NO-mediated modulation of blood pressure. Pflugers Arch. 2014 466(12) 2205–2214
  94. Svenningsen P, Nielsen MR, Marcussen N, Walter S, Jensen BL. TMEM16A is a Ca(2+) -activated Cl(-) channel expressed in the renal collecting duct. Acta Physiol (Oxf). 2014, 212(2) 166–174
  95. Bhatia T., P. Husen, J.H. Ipsen, L.A. Bagatolli, A.C. Simonsen Fluid domain patterns in free-standing membranes captured on a solid support –, Biochimica et Biophysica Acta (BBA) – Biomembranes, 2014, 1838 (10), 2503-2510.
  96. Bloksgaard M, Brewer J, Pashkovski E, Ananthapadmanabhan KP, Sørensen JA, and Bagatolli LA, Effect of detergents on the physico-chemical properties of skin stratum corneum: A two-photon excitation fluorescence microscopy study. Int J Cosmet Sci. 2014, Feb;36(1):39-45
  97. Clausen MP, Arnspang EC, Ballou B, Bear JE, Lagerholm BC, “Single Molecule Multi-species Tracking in Live Cells”, PLoS ONE, 2014, 9(6), e97671-12 (2014)
  98. L. Salvemini, D.M. Gau, J. Reid, L.A. Bagatolli,and P. D.J. Moens. Low PIP2 molar fractions induce nanometer size clustering in giant unilamellar vesicles containing POPC  Chem Phys Lipids, 2014 177:51-63
  99. J. Dreier, J.R. Brewer, and A. C. Simonsen. Systematic Variation of Gel-Phase Texture in Phospholipid Membranes. Langmuir, 2014, 30:10678−10685
  100.  Zdżalik D, Vågbø CB, Kirpekar F, Davydova E, Puścian A, Maciejewska AM, Krokan HE, Klungland A, Tudek B, van den Born E, Falnes P&Oslash. PLoS One. 2014 9(6):e98729.
  101.  Peng L, Rasmussen MI, Chailyan A, Houen G, Højrup P.Probing the structure of human protein disulfide isomerase by chemical cross-linking combined with mass spectrometry. J Proteomics. 2014, 28 (108),1-16.
  102.  Huang H, Larsen MR, Palmisano G, Dai J, Lametsch R.Quantitative phosphoproteomic analysis of porcine muscle within 24 h postmortem. J Proteomics. 2014, 106:125-39.
  103.  Zhao X, Bak S, Pedersen AJ, Jensen ON, Højlund K. Insulin Increases Phosphorylation of Mitochondrial Proteins in Human Skeletal Muscle in Vivo. J Proteome Res. 2014, 13(5):2359-69.
  104.  Palmowski P, Rogowska-Wrzesinska A, Williamson J, Beck HC, Mikkelsen JD, Hansen HH, Jensen ON. Acute Phencyclidine Treatment Induces Extensive and Distinct Protein Phosphorylation in Rat Frontal Cortex. J Proteome Res. 2014 13(3):1578-92.
  105.  Such-Sanmartín G, Ventura-Espejo E, Jensen ON. Depletion of Abundant Plasma Proteins by Poly(N-isopropylacrylamide-acrylic acid) Hydrogel Particles. Anal Chem. 2014 86(3), 1543-50.


  106.  M. M. B. Nielsen and A. C. Simonsen. Imaging Ellipsometry of Spin-Coated Membranes: Mapping of Multilamellar Films, Hydrated Membranes, and Fluid Domains.  Langmuir, 2013, 29:1525−1532.
  107. Terp MG, KA Olesen, EC Arnspang, RR Lund, BC Lagerholm, HJ Ditzel, R Leth-Larsen. Anti-human CD73 mAb inhibits metastasis formation in human breast cancer by inducing clustering and internalization of CD73 expressed on the surface of cancer cells. J Immunol. 2013, 191:4165-73, 2013.
  108.  J. Dreier, J.R. Brewer, and A. C. Simonsen. Hydrophobic Mismatch Triggering Texture Defects in Membrane Gel Domains J. Phys. Chem. Lett., 20134:2789−2793
  109.  A. H. Hansen, K. T. Sørensen, R. Mathieu, A. Serer, L. Duelund, H. Khandelia, P. L. Hansen, A. Cohen Simonsen. Propofol modulates the lipid phase transition and localizes near the headgroup of membranes. Chem Phys Lipids. 2013, 175:84-91.
  110.  Hansen TB, Jensen TI, Clausen BH, Bramsen JB, Finsen B, Damgaard CK, Kjems J. Natural RNA circles function as efficient microRNA sponges. Nature, 2013495(7441):384-8.
  111. Terp MG, Olesen KA, Arnspang EC, Lund RR, Lagerholm BC, Ditzel HJ, Leth-Larsen R. Anti-human CD73 mAb inhibits metastasis formation in human breast cancer by inducing clustering and internalization of CD73 expressed on the surface of cancer cells. 2013, 191(8):4165-73. 
  112. Arnspang EC, Schwartzentruber J, Clausen MP, Wiseman PW, Lagerholm BC. Bridging the Gap between Single Molecule and Ensemble Methods for Measuring Lateral Dynamics in the Plasma Membrane, PLoS ONE, 2013, 8 (12) e78096.
  113. J. Bernardino de la Serna, S. Hansen, Z. Berzina, A. C. Simonsen, H. K. Hannibal-Bach, J. Knudsen, C. S. Ejsing and L.A. Bagatolli. Compositional and structural characterization of monolayers and bilayers of native pulmonary surfactant from wild type mice. BBActa Biomembranes, 2013  1828(11):2450-9.  
  114. Nielsen MM, Simonsen AC. Imaging ellipsometry of spin-coated membranes: mapping of multilamellar films, hydrated membranes, and fluid domains.Langmuir. 2013, 29(5):1525-32.
  115. Bloksgaard M, Brewer J, Bagatolli LA. Structural and dynamical aspects of skin studied by multiphoton excitation fluorescence microscopy-based methods. Eur J Pharm Sci., 2013, 50(5):586-94.
  116. O. G. Mouritsen, L. Duelund, L. A. Bagatolli and H. Khandelia. . The name of deliciousness and the gastrophysics behind it "Flavour”, 2013, 2, 9.
  117. J. Brewer, J. Kubiak J, M. Bloksgaard, J. A. Sørensen and L.A. Bagatolli. “Spatially resolved two color diffusion measurements in human skin applied to transdermal liposome penetration. J. Investig. Dermatol. 2013, 133:1260–1268.
  118. Clausen MP, Lagerholm BC. Visualization of Plasma Membrane Compartmentalization By High-Speed Quantum Dot Tracking, Nano Letters, 2013, 13 (6), 2332-2337.
  119. Karlsson T, Lagerholm BC, Vikström E, Loitto VM, Magnusson KE. Water fluxes through aquaporin-9 prime epithelial cells for rapid wound healing. Biochem Biophys Res Commun. 2013, 430(3):993-8.
  120. J.Schjerning, T.R. Uhrenholt, P. Svenningsen, P.M. Vanhoutte, O. Skøtt, B. L. Jensen and P. B. L. Hansen. Histamine-dependent prolongation by aldosterone of vasoconstriction in isolated small mesenteric arteries of the mouse. Am J Physiol Heart Circ Physiol, 2013 304:H1094-H1102. 


  121. O. Albrektsen, R. L. Eriksen, S. M. Novikov, D. Schall, M. Karl, S. I. Bozhevolnyi and A. C. Simonsen. High resolution imaging of few-layer graphene.  J. Appl. Phys. 2012,  111, 064305.
  122. Leth-Larsen R, MG Terp, AG Christensen, D Elias, T Kühlwein , ON Jensen, OW Petersen, HJ Ditzel. Functional heterogeneity within the CD44 high human breast cancer stem cell-like compartment reveals a gene signature predictive of distant metastasis. Mol Med. 2012, 18: 1109-1121.
  123. Terp MG, RR Lund, ON Jensen, R Leth-Larsen, HJ Ditzel. Identification of markers associated with highly aggressive metastatic phenotypes using quantitative comparative proteomics. Cancer Genomics & Proteomics, 20129:265-273.
  124. Gjerstorff MF, HI Rösner, CB Pedersen, KB Greve, S. Schmidt, D Elias, Wilson KL, J Mollenhauer, H Besir, FM Poulsen, NE Møllegaard, HJ Ditzel. GAGE Cancer-germline antigens are recruited to the nuclear envelope by germ cell-less (GCL). PLoS One, 2012, 7(9):e45819.
  125. Arnspang, Eva C., Jonathan R. Brewer, and B. Christoffer Lagerholm. Multi-Color Single Particle Tracking with Quantum Dots. PLoS ONE, 20127(11) e48521.
  126. Dreier, J., Brewer, J., and Simonsen, A. C. Texture defects in lipid membrane domains, Soft Matter, 2012, 8, 4894.
  127. P. Husen , L. Arriaga , F. Monroy , J. Ipsen and L.A: Bagatolli. Morphometric image analysis of giant vesicles: a new tool for quantitative thermodynamics studies of phase-separation in lipid membranes, Biophys. J. 2012, 103:2304-2310.
  128. M. Bloksgaard, S. Bek, D. Neess, J. Brewer, H. K. Hannibal-Bach, T. Helledie, C. S. Ejsing, C. Fenger, M. Due, J. Chemnitz, B. Finsen, A. Clemmensen, J. Wilbertz, H. Saxtorph, J. Knudsen, L.A. Bagatolli and S. Mandrup. The Acyl Coenzyme A Binding protein is required for normal epidermal barrier function in mice, J. Lip Res., 2012, 53(10):2162-74.
  129. S. Troeira Henriques, Y.H. Huang, M.A.R.B. Castanho, L. A. Bagatolli, S. Sonza, G. Tachedjian, N.L. Daly and D.J. Craik. “Phosphatidylethanolamine-binding is a common feature for cyclotide-membrane interactions J. Biol. Chem., 2012, 287(40):33629-43
  130. M. B. Engelund, A. S. L. Yu, J. Li, S. S. Madsen, N. J. Færgeman, and C. K. Tipsmark. Functional characterization and localization of a gill-specific claudin isoform in Atlantic salmon.  Am J Physiol Regul Integr Comp Physiol, 2012, 302: R300-R311.
  131. Bloksgaard M, Svane-Knudsen V, Sørensen JA, Bagatolli L, Brewer J. Structural characterization and lipid composition of acquired cholesteatoma: a comparative study with normal skin. Otol Neurotol. 2012, 33(2):177-83.
  132. E. A. Christensen, P. Kulatunga, and B. C. Lagerholm. A Single Molecule Investigation of the Photostability Of Quantum Dots. PLoS One, 2012, 7(8):e44355.
  133. Husen P, Fidorra M, Härtel S, Bagatolli LA, Ipsen JH. A method for analysis of lipid vesicle domain structure from confocal image data. Eur Biophys J., 2012, 41(2):161-75.
  134. Arnspang EC, Brewer, J, Lagerholm BC. Multi-color single particle tracking with quantum dots. PLoS One. 2012;7(11):e48521.
  135. Stock RP, Brewer J, Wagner K, Ramos-Cerrillo B, Duelund L, Drescher Jernshøj K, Olsen LF, Bagatolli LA. Sphingomyelinase D activity in model membranes: structural effects of in situ generation of ceramide-1-phosphate.  PLOS One. 2012, 7(4): e36003.
  136. M. Bloksgaard, S. Bek, D. Neess, J. Brewer, H. K. Hannibal-Bach, T. Helledie, C. S. Ejsing, C. Fenger, M. Due, J. Chemnitz, B. Finsen, A. Clemmensen, J. Wilbertz, H. Saxtorph, J. Knudsen, L.A. Bagatolli and S. Mandrup. The Acyl Coenzyme A Binding protein is required for normal epidermal barrier function in mice. J. Lip Res., 2012, 53(10):2162-74.
  137. Iwai, H.M. Han, S. Svensson , L.-G. Öfverstedt , J. Anwar , J. Brewer , M. Bloksgaard , L. den Holländer , A. Laloeuf , D. Nosek , S. Masich , L. Bagatolli , U. Skoglund and L. Norlen. Molecular Structure of the Human Skin Barrier. J. Investig. Dermatol. 2012, 132(9):2215-25.
  138. Andersen, T. E., Khandige, S., Madelung, M., Brewer, J., Kolmos, H. J., and Moller-Jensen, J., Escherichia coli Uropathogenesis In Vitro: Invasion, Cellular Escape, and Secondary Infection Analyzed in a Human Bladder Cell Infection Model, Infection and Immunity, 2012, 80, 1858.
  139. Wüstner, D. Following intracellular cholesterol transport by linear and non-linear optical microscopy of intrinsically fluorescent sterols. Curr. Pharm. Biotechnol. 2012, 13, 303-318.
  140. Wüstner, D., Lund, F.W. and Solanko, L.M. Quantitative fluorescence studies of intracellular sterol transport and distribution. In Springer Series of Fluorescence “Properties and Functions of Biological Membranes investigated by Fluorescence Methods“, Ed.: Yves Mely and Guy Duportail, Springer Press, 2012, p. 185-213.
  141. Lund, F.W., Lomholt, M.A., Solanko, L. M., Bittman, R. and Wüstner, D. Two-Photon Time-Lapse Microscopy of BODIPY-Cholesterol Reveals Anomalous Sterol Diffusion in Chinese Hamster Ovary Cells. BMC Biophysics, 2012, 5(1):20 


  142. Joergensen L, Klösgen B, Simonsen AC, Borch J, Hagesaether E. New insights into the mucoadhesion of pectins by AFM roughness parameters in combination with SPR. Int J Pharm., 2011, 411: 162-8.
  143. F. Caschera F, J. B. de la Serna, P. M. Löffler, T. E. Rasmussen, M. M. Hanczyc, L. A. Bagatolli, and P. A. Monnard. Stable vesicles composed of monocarboxylic or dicarboxylic fatty acids and trimethylammonium amphiphiles. Langmuir. 2011, 27:14078-90.
  144. M. P. Clausen, and B. C. Lagerholm. The probe rules in single particle tracking. Current Protein and Peptide Science, 2011, 12, 699-713.
  145. D. Wüstner, J. B. Brewer, L. Bagatolli, and D. Sage. Potential of ultraviolet wide-field imaging and multiphoton microscopy for analysis of dehydroergosterol in cellular membranes. Microscopy Research and Technique, 2011, 74, 92–108.
  146. L. Jakobsen, K. Vanselow, M. Skogs, Y. Toyoda, E. Lundberg, I. Poser, L. G. Falkenby, M. Bennetzen, J. Westendorf, E. A. Nigg, M. Uhlen, A. A. Hyman, and J. S. Andersen. Novel asymmetrically localizing components of human centrosomes identified by complementary proteomics methods. The EMBO Journal, 2011,  30, 1520 - 1535.
  147. A. Z. Andersen, L. Duelund, Jonathan Brewer, P. Kiil Nielsen, T. Birk, K. Garde, B. Kallipolitis, N. Krebs, L. Bagatolli. Biophysical Evaluation of Food Decontamination Effects on Tissue and Bacteria. Food Biophysic. 2011, 6, 170-182.
  148. J. Kubiak, J. Brewer, S. Hansen, and L. A. Bagatolli. Lipid Lateral Organization on Giant Unilamellar Vesicles Containing Lipopolysaccharides. Biophysical Journal, 2011, 100,  978-986
  149. K. I. Pakkanen, L. Duelund, K. Qvortrup, J. S. Pedersen, J. H. Ipsen. Mechanics and dynamics of triglyceride-phospholipid model membranes: implications for cellular properties and function. Biophysica et Biochimica Acta, Biomembranes. 2011, 1808(8):1947-56.
  150. U. Bernchou, H. Midtiby, J. H. Ipsen, A. C. Simonsen. Correlation between the ripple phase and stripe domains in membranes. Biochimica et Biophysica Acta (BBA) - Biomembranes, 2011, 1808, 2849-2858.
  151. Nielsen JB, Plasencia I, Sørensen JA, Bagatolli LA. Storage conditions of skin affect tissue structure and subsequent in vitro percutaneous penetration. Skin Pharmacol Physiol. 2011, 24: 93-102.
  152. Dols-Perez A, Fumagalli L, Simonsen AC, Gomila G. Ultrathin spin-coated dioleoylphosphatidylcholine lipid layers in dry conditions: a combined atomic force microscopy and nanomechanical study. Langmuir. 2011, 27(21):13165-72.


  153. J. Brewer, J. Bernardino de la Serna, K. Wagner and L.A. Bagatolli. Multiphoton Excitation Fluorescence Microscopy in planar membrane systems. Biochim Biophys Acta. Biomembranes, 2010, 1798, 1301-8.
  154. M. T. Dohm, N. J. Brown, S. L. Seurynck-Servoss, J. Bernardino de la Serna, and A. E. Barron. Mimicking SP-C palmitoylation on a peptoid-based SP-B analogue markedly improves surface activity Biochim Biophys Acta. Biomembranes, 2010, 1798, 1663-1678.
  155. K. I. Pakkanen, L. Duelund, M. Vuento, and J. H. Ipsen. Phase coexistence in a triolein-phosphatidylcholine system. Implications for lysosomal membrane properties. Chem Phys lipid, 2010, 163, 218-227.
  156. S. Andreassen, K. L. Steimle, M. L. Mogensen, J. Bernardino de la Serna, S. Rees, D. S. Karbing. The effect of tissue elastic properties and surfactant on alveolar stability. Journal of Applied Physiology, 2010, 109, 1369-77.
  157. H. Khandelia, L. Duelund, K. I. Pakkanen and J. H. Ipsen. Triglyceride Blisters in Lipid Bilayers: Implications for Lipid Droplet Biogenesis and the Mobile Lipid Signal in Cancer Cell Membranes. PLoS ONE, 2010, 5, 1281.
  158. Bagatolli LA. Microscopy imaging of membrane domains. Biochim Biophys Acta. 2010, 1798(7):1285.
  159. Bagatolli LA, Ipsen JH, Simonsen AC, Mouritsen OG. An outlook on organization of lipids in membranes: searching for a realistic connection with the organization of biological membranes. Prog Lipid Res., 2010, 49(4):378-89.
  160. Montes LR, Ahyayauch H, Ibarguren M, Sot J, Alonso A, Bagatolli LA, Goñi FM. Electroformation of giant unilamellar vesicles from native membranes and organic lipid mixtures for the study of lipid domains under physiological ionic-strength conditions. Methods Mol Biol., 2010, 606:105-14.
  161. Bouvrais H, Pott T, Bagatolli LA, Ipsen JH, Méléard P. Impact of membrane-anchored fluorescent probes on the mechanical properties of lipid bilayers. Biochim Biophys Acta. 2010, 1798(7):1333-7.
  162. Mollenhauer J, D Stamou, A Flyvbjerg, J Wengel, U Gether, J Kjems, T Bjørnholm, F Besenbacher. David versus Goliath. Nanomedicine: Nanotechnology, Biology and Medicine. 2010, 6: 504-509.
  163. Sáenz, J. Mojica-Lázaro, L.A. Bagatolli, and C. Casals. C-reactive protein increases membrane fluidity and distorts lipid lateral organization of pulmonary surfactant. Protective role of surfactant protein A. FASEB J., 2010, 24(10):3662-73.
  164. H. Bouvrais, T. Pott, L. A. Bagatolli, J.H. Ipsen, and P. Meleard. Impact of membrane-anchored fluorescent probes on the mechanical properties of lipid bilayers. Biochim Biophys Acta, 2010, 1798(7):1333-1337.
  165. D. A. Brüggemann, J. Brewer, Jens Risbo, and L.A. Bagatolli. Second Harmonic Generation Microscopy: a tool for spatially and temporally resolved studies of heat induced structural changes in meat. Food Biophysics, 2010, 5:1-8.
  166. Wong MS, Delansorne R, Man RY, Svenningsen P, Vanhoutte PM. Chronic treatment with vitamin D lowers arterial blood pressure and reduces endothelium-dependent contractions in the aorta of the spontaneously hypertensive rat. Am J Physiol Heart Circ Physiol., 2010299(4):H1226-34.